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Restriction Enzyme Buffers
|
| Buffer |
pH
|
Tris-HCl
|
MgCl2
|
NaCl
|
KCl
|
DTT
|
| A |
7.5 |
6 |
6 |
6 |
- |
1 |
| B |
7.5 |
6 |
6 |
50 |
- |
1 |
| C |
7.9 |
10 |
10 |
50 |
- |
1 |
| D |
7.9 |
6 |
6 |
150 |
- |
1 |
| E |
7.5 |
6 |
6 |
100 |
- |
1 |
| F |
8.5 |
10 |
10 |
100 |
- |
1 |
| G |
8.2 |
50 |
5 |
- |
- |
- |
| H |
7.5 |
90 |
10 |
50 |
- |
- |
| J |
7.5 |
10 |
7 |
- |
50 |
1 |
| K |
7.4 |
10 |
10 |
- |
150 |
- |
| L |
9.0 |
10 |
3 |
100 |
- |
- |
|
MULTI-CORE™ Buffer (1X) = 25mM Tris-Acetate, pH 7.5 (at 37°C), 100mM potassium acetate, 10mM
magnesium acetate, 1mM DTT.
Notes:
|
Pharmacia
This buffer is originally from Pharmacia (SE) and now available from GE Healthcare
The optimum concentration of OPA+ buffer - the concentration at which the
enzyme's activity is highest (the buffer is a 10× concentrate1).
The enzyme's activity in the optimum concentration of OPA+ buffer as a percentage of its activity in the
assay buffer listed on the Certificate of Analysis.
Percentages are designated as follows: ++ = 50-99%; +++ = 100%; ++++ = 101-199%; +++++ > 200%
|
Restriction enzyme |
Optimum OPA buffer conc. |
Activity in OPA as a percentage of activity in assay buffer |
|
Aat II |
1× |
+++++ |
|
Acc I |
1× |
++ |
|
Alu I |
1× |
+++ |
|
Apa I |
0.5× |
+++++ |
|
Ava I |
2× |
+++ |
|
Ava II |
1× |
+++++ |
|
Bam H I |
1× |
++++ |
|
Bgl I2 |
1× |
++ |
|
Bgl II |
1× |
+++ |
|
Cla I |
1× |
+++++ |
|
Dde I |
1× |
+++++ |
|
Dra I |
1× |
+++ |
|
EcoR I3 |
1× |
+++ |
|
EcoR V |
2× |
+++ |
|
Hae III |
1× |
+++ |
|
Hha I |
1× |
+++ |
|
Hinc II |
1× |
+++ |
|
Hind III |
1× |
+++ |
|
Hinf I |
1× |
+++++ |
|
Hpa I |
1× |
+++ |
|
Hpa II |
1× |
+++ |
|
Kpn I |
1× |
+++ |
|
Mlu I |
2× |
+++ |
|
Msp I |
1× |
+++ |
|
Nar I |
1× |
+++ |
|
Nco I 3 |
1× |
++++ |
|
Nde I |
2× |
++ |
|
Nhe I |
1× |
+++ |
|
Not I4 |
2× |
++++ |
|
Pst I |
1× |
+++++ |
|
Pvu I |
2× |
++++ |
|
Pvu II5 |
1× |
+++ |
|
Rsa I |
1× |
+++++ |
|
Sac I |
1× |
+++ |
|
Sac II |
1× |
++ |
|
Sal I |
2× |
++ |
|
Sau3A I |
1× |
+++ |
|
Sca I |
2× |
+++++ |
|
Sfi I |
1× |
+++ |
|
Sma I |
1× |
+++ |
|
Sph I |
1× |
+++ |
|
Stu I |
1× |
+++ |
|
Taq I |
1× |
++++ |
|
Xba I |
1× |
+++ |
|
Xho I |
1× |
+++++ |
1 OPA+ buffer (27-0901-02) will be provided free of charge upon
request. Please inquire.
2
With Bgl I, addition of KCl to a final concentration of 100 mM KCl is
required.
3 With EcoR I and Nco
I, star activity may be observed in 1× OPA+ when
DNA is digested for longer than 1 hour. Star activity can be eliminated during extended incubations by
using 2× concentration.
4 With Not I, addition of Triton X-100 to a final concentration of 0.01% (w/v) is required.
5 With Pvu II, addition of NaCl
to a final concentration of 50 mM is required.